Protocol No: ECCT/22/03/04 Date of Protocol: 28-02-2022

Study Title:

A Multi-Centre, Randomized, Double Blind, Phase 2b Trial to Evaluate the Safety and Immunogenicity of Janssen Ad26COVS1 and Novavax NVX-CoV2373 COVID-19 vaccines for Homologous and Heterologous Boosting in Adolescents and Adults Aged 12 to 64 Years with and without HIV infection in 3 African Countries (Kenya, Democratic Republic of Congo, and Rwanda).

A Multi-Centre, Randomized, Double Blind, Phase 2b Trial to Evaluate the Safety and Immunogenicity of Janssen Ad26COVS1 (or mRNA (Moderna mRNA-1273 or Pfizer/BNT) and Novavax NVX-CoV2373 COVID-19 vaccines for Homologous and Heterologous Boosting in Adolescents and Adults Aged 12 to 64 Years with and without HIV infection in 3 African Countries (Kenya, Democratic Republic of Congo, and Rwanda).

Study Objectives:

Primary safety Objectives

1. To evaluate reactogenicity (solicited adverse events (AEs) Ad26.COV2S1 and NVX-CoV2372 following boosting. 2. To evaluate Serious Adverse events related to vaccination of Ad26.COV2S1 or NVX-CoV2372 during the entire study.

Primary Immunogenicity Objectives

To evaluate the immunogenicity of Ad26.COV2S1 and NVX-CoV2372 vaccines at day 28.

Secondary safety Objectives

1.To evaluate all unsolicited AEs post-vaccination through 28 days and treatment emergent adverse events through 85 days in all participants. 2.To evaluate safety in terms of adverse events of special interest (AESIs) following vaccination, for HIV (+) participants through end of study. 3.To describe severe adverse events through end of study in all participants.

Secondary Immunogenicity Objectives

1.To compare the immunogenicity of heterologous boost in participants at Day 28 (IgG ELISA and neutralization). 2.To compare the durability of response through end of study (IgG ELISA and neutralization). 3.To evaluate mucosal immunogenicity of heterologous boost in participants at Day 28 (S-IgA ELISA). Exploratory Objectives 1.To evaluate the occurrence SARS-CoV-2 variants of concern in HIV (+) participants with moderate to severe disease following boosting vaccination. 2.To evaluate the Cell Mediated Immune response of Ad26.COV2S1 and NVX-CoV2372 vaccines in adults HIV (+) and HIV (-) participants. 3.To demonstrate the continued efficacy of either vaccine (Ad26.COV2S1 or NVX-CoV2372), when given in a heterologous boost setting, in the prevention of SARS-CoV-2 infection in HIV (+) and HIV (-) participants. 4.To identify a threshold of immune protection for HIV (+) and HIV (-) participants to prevent SARS-CoV-2 following vaccination.

Laymans Summary:

COVID-19 is a worldwide disease that emerged in the human population in Wuhan, China in December 2019. As of January 2022, there were over 328 million cases worldwide and over 5.54 million deaths as a result of the infection. According to WHO Situation Report obtained 17 January 2022, Africa has 7 million confirmed cases with over 160, 804 deaths. The worldwide disease (pandemic) has caused global suffering, mortality, and severe economic pressures, hence the urgent global need to develop effective and safe vaccines and drugs to make them available at scale and equitably across all countries. Despite the rapid successes in vaccine development, the World Health Organization and US Food and Drug Administration (FDA) have reported that the COVID-19 vaccines require additional information that was not available from the big vaccine studies. Africa has a high burden of HIV with Kenya having about 5% of the population infected and in some counties in Western Kenya reporting as high as 20% of the population according to the National AIDS and STI Control Programme (NASCOP) in 2020.

Emerging variants of concern such as Delta and Omicron, have led to new waves of COVID-19 cases worldwide and caused public health problems. Studies suggest that some individuals, especially those with poor immunity, who received either a single dose or two doses of primary vaccination against COVID-19, developed only a weak immune response to the disease. However, other studies have shown reducing immunity to primary vaccination against new cases, and a declining vaccine effectiveness against COVID-19 from about 6 months after primary vaccinations. These factors have led to consideration of the need for booster doses for vaccinated populations.

A few studies have shown that some of the WHO approved COVID-19 vaccines are more effective when a mix and match primary and boosting schedules is used, by reducing in the number of severe COVID-19 disease and hospital admissions. Studies are currently being done on emerging COVID-19 variants, vaccine constraints, and the need to achieve a broad immune response based on mix and match boosting strategies. There is need for additional studies to assess how effective the vaccines are in the context of heterologous boost in populations with low immunity in order to address existing gaps in medical information.

The Victoria Biomedical Research Institute (VIBRI) in Kenya, together with research partners from Kenya, Rwanda and the Democratic Republic of Congo plan to conduct a vaccine study in these countries to assess safety, and immune responses seen when a mix and match booster vaccination schedule is given to participants, how long the immune responses last after the booster and monitoring for new COVID-19 cases after vaccination. The study is important because it addresses the need for more people to access COVID-19 vaccines and make it more equal and also protects our population from shortage of vaccine supplies.

Abstract of Study:

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a novel coronavirus that emerged in the human population in Wuhan City, Hubei Province, China in December 2019. As of Jan 2022, there are over 328 million SARS-CoV-2 case worldwide and over 5.54 million deaths as a result of infection with SARS-CoV-2 (COVID-19). According to WHO Situation Report on 17 January 2022, Africa has 7 million confirmed cases with over 160, 804 deaths. The COVID-19 pandemic has caused global suffering, mortality, and severe economic pressures. There is thus a continued urgent global need to develop effective and safe vaccines and drugs to make them available at scale and equitably across all countries including in Africa.

Despite the rapid successes in vaccine development and issuance of WHO Emergency Use Listings (EUL), the WHO SAGE Interim Reports and FDA Emergency Use Authorization (EUA) for COVID-19 vaccine evaluations have reported limitations on safety and efficacy data in certain populations including children and adolescents, pregnant women, and immunocompromised individuals such as those with HIV/AIDS who are at higher risk of severe COVID-19 disease. Africa is especially vulnerable in this respect given the high prevalence of HIV/AIDS in countries such as Kenya where the prevalence is over 20% in some places.

The risk of recurring new waves of COVID-19 cases caused by Variants of Concern (VOC) exacerbate global public health crisis. A weak immune response to either single or two doses of primary vaccination against SARS-CoV-2 has been observed in immunocompromised population. Emerging data from observational studies consistently show waning immunity to primary vaccination for SARS-CoV-2 mutants, and a decline in vaccine effectiveness against SARS-CoV-2 infection and COVID-19 with time since primary vaccinations. These factors have led to consideration of the potential need for, and optimal timing of, booster doses for vaccinated populations. However, vaccine inequality, lack of availability of the same vaccine product used for primary vaccinations and unpredictable vaccine supply remain a challenge in LMIC. Consideration of heterologous COVID-19 vaccine to allow interchangeability (mix and match) use of vaccine products available in LMIC would therefore allow for programmatic flexibility.

Based on a recent systematic review and meta-regression analysis, across the four WHO EUL COVID-19 vaccines with the most data (i.e., BNT162b2, mRNA 1273, Ad26.COV2.S and ChAdOx1-S [recombinant] vaccine), vaccine effectiveness against severe COVID-19 decreased by about 8% (95% confidence interval (CI): 4-15%) over a period of 6 months in all age groups. In adults above 50 years, vaccine effectiveness against severe disease decreased by about 10% (95% CI: 6 – 15%) over the same period. Vaccine effectiveness against symptomatic disease decreased by 32% (95% CI: 11 – 69%) for those above 50 years of age. For some inactivated vaccines (CoronaVac and COVID-19 vaccine BIBP), WHO has already issued the recommendation for the administration of an additional dose to those aged 60 years or older as part of the primary series to make initial immunity more robust.

The FDA issued a EUA for the Janssen Ad26.COV.S1 COVID-19 vaccine for active immunization to prevent COVID-19 caused by SARS-CoV-2 in individuals 18 years of age and older. In September 2021, both the single dose and 2 dose Janssen COVID-19 vaccine regimens demonstrated high efficacy (79% protection (CI, 77%-80%) for COVID-19-related infections and 81 percent (CI, 79%-84%) for COVID-19-related hospitalizations. vs 94% (CI, 58%-100%) protection against symptomatic COVID-19 in the U.S. respectively. Furthermore, the safety profile of the vaccine remained consistent and generally well-tolerated in the 2 regimens. Finally, when a booster of the Janssen COVID-19 vaccine given 6 months after the single shot, antibody levels increased nine-fold one week after the booster and continued to climb to 12-fold higher four weeks after the booster.

On June 14, 2021, Novavax reported the results of its PREVENT-19 pivotal Phase 3 trial of the NVX-CoV2373. The results showed an overall vaccine efficacy of 90.4% (95% CI: 82.9 – 94.6) in the US and Mexico. Sequenced data showed a vaccine efficacy was 93.2% (95% CI: 83.9 – 97.1) against Variants of Concern and Variants of Interest which represented 82% of cases. Studies of NVX-CoV2373 with Matrix-M adjuvant have demonstrated an acceptable safety and reactogenicity profile in adults ≥18 years of age. On December 20, 2021, the WHO issued interim recommendations and authorized under its emergency use listing (EUL) procedure, the NVX-CoV2373 COVID-19 vaccine developed by Novavax and Serum Institute of India.

The FDA and WHO have both recommended continued evaluation of vaccine effectiveness following issuance of a EUA and/or licensure which is critical to address the existing uncertainties, with high urgency to understand homologous and heterologous boosting, both for improved coverage of variants of concern and due to limitations of global vaccine availability. The VIBRI Consortium proposes to carry out a Multi-Centre Phase 2b RCT to evaluate the Safety and Immunogenicity of the Janssen Ad26COVS1 and the Novavax NVX-CoV2373 used as homologous and heterologous boost strategies among HIV positive adolescents and adults with a small control arm of HIV (-) participants. The trial will enroll about 300 HIV(+) adolescents 12-17 years and about 1,650 adults aged 12 to 64 years, who have completed a primary series with a homologous vaccine series based on any one platform of a) mRNA (Moderna or Pfizer), b) adenovirus 26 (J&J) or c) inactivated (Sinopharm). These three have been the main vaccine platforms introduced across the three participating countries (Kenya, Democratic Republic of Congo and Rwanda) as of the current protocol. Participants must have completed the primary series 3-6 months prior to enrollment.

Given the difference in vaccine rollout between countries, the timing of enrollment within each country is expected to stagger. All participants will be randomized 1:1 within their primary vaccine platform to receive either a single dose of either Janssen Ad26COVS1 vaccine or Novavax NVX-CoV2373 COVID-19 vaccine between 5 and 7 months from completion of their primary series. Due to the uncertainty of vaccine supply and to allow for adequate capture of participants, the pre-booster vaccination enrollment period may vary anywhere from -85 days to 0 days till the time of boost (Day 0).

1

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a novel coronavirus that emerged in the human population in Wuhan City, Hubei Province, China in December 2019. As of Jan 2022, there are over 328 million SARS-CoV-2 case worldwide and over 5.54 million deaths as a result of infection with SARS-CoV-2 (COVID-19). According to WHO Situation Report on 17 January 2022, Africa has 7 million confirmed cases with over 160, 804 deaths. The COVID-19 pandemic has caused global suffering, mortality, and severe economic pressures. There is thus a continued urgent global need to develop effective and safe vaccines and drugs to make them available at scale and equitably across all countries including in Africa.

Despite the rapid successes in vaccine development and issuance of WHO Emergency Use Listings (EUL), the WHO SAGE Interim Reports and FDA Emergency Use Authorization (EUA) for COVID-19 vaccine evaluations have reported limitations on safety and efficacy data in certain populations including children and adolescents, pregnant women, and immunocompromised individuals such as those with HIV/AIDS who are at higher risk of severe COVID-19 disease. Africa is especially vulnerable in this respect given the high prevalence of HIV/AIDS in countries such as Kenya where the prevalence is over 20% in some places.

The risk of recurring new waves of COVID-19 cases caused by Variants of Concern (VOC) exacerbate global public health crisis. A weak immune response to either single or two doses of primary vaccination against SARS-CoV-2 has been observed in immunocompromised population. Emerging data from observational studies consistently show waning immunity to primary vaccination for SARS-CoV-2 mutants, and a decline in vaccine effectiveness against SARS-CoV-2 infection and COVID-19 with time since primary vaccinations.  These factors have led to consideration of the potential need for, and optimal timing of, booster doses for vaccinated populations. However, vaccine inequality, lack of availability of the same vaccine product used for primary vaccinations and unpredictable vaccine supply remain a challenge in LMIC. Consideration of heterologous COVID-19 vaccine to allow interchangeability (mix and match) use of vaccine products available in LMIC would therefore allow for programmatic flexibility.

Based on a recent systematic review and meta-regression analysis, across the four WHO EUL COVID-19 vaccines with the most data (i.e., BNT162b2, mRNA 1273, Ad26.COV2.S and ChAdOx1-S [recombinant] vaccine), vaccine effectiveness against severe COVID-19 decreased by about 8% (95% confidence interval (CI): 4-15%) over a period of 6 months in all age groups.  In adults above 50 years, vaccine effectiveness against severe disease decreased by about 10% (95% CI: 6 – 15%) over the same period.  Vaccine effectiveness against symptomatic disease decreased by 32% (95% CI: 11 – 69%) for those above 50 years of age. For some inactivated vaccines (CoronaVac and COVID-19 vaccine BIBP), WHO has already issued the recommendation for the administration of an additional dose to those aged 60 years or older as part of the primary series to make initial immunity more robust.

The FDA issued a EUA for the Janssen Ad26.COV.S1 COVID-19 vaccine for active immunization to prevent COVID-19 caused by SARS-CoV-2 in individuals 18 years of age and older. In September 2021, both the single dose and 2 dose Janssen COVID-19 vaccine regimens demonstrated high efficacy (79% protection (CI, 77%-80%) for COVID-19-related infections and 81 percent (CI, 79%-84%) for COVID-19-related hospitalizations. vs 94% (CI, 58%-100%) protection against symptomatic COVID-19 in the U.S. respectively. Furthermore, the safety profile of the vaccine remained consistent and generally well-tolerated in the 2 regimens. Finally, when a booster of the Janssen COVID-19 vaccine given 6 months after the single shot, antibody levels increased nine-fold one week after the booster and continued to climb to 12-fold higher four weeks after the booster.

On June 14, 2021, Novavax reported the results of its PREVENT-19 pivotal Phase 3 trial of the NVX-CoV2373. The results showed an overall vaccine efficacy of 90.4% (95% CI: 82.9 – 94.6) in the US and Mexico. Sequenced data showed a vaccine efficacy was 93.2% (95% CI: 83.9 – 97.1) against Variants of Concern and Variants of Interest which represented 82% of cases. Studies of NVX-CoV2373 with Matrix-M adjuvant have demonstrated an acceptable safety and reactogenicity profile in adults ≥18 years of age. On December 20, 2021, the WHO issued interim recommendations and authorized under its emergency use listing (EUL) procedure, the NVX-CoV2373 COVID-19 vaccine developed by Novavax and Serum Institute of India.

The pivotal phase 3 registration trial of the Moderna mRNA-1273 COVID-19 vaccine was conducted in the United States of America and involved about 30 000 participants aged 18 years or older with no known history of SARS-CoV-2 infection. Efficacy was evaluated for those subjects who received the second dose 21-42 days after the first dose. Vaccine efficacy (VE) was estimated as 94.1% (95% confidence interval (CI) 89.3–96.8%). In the phase 3 trial, the safety data supported a favorable safety profile. Reactogenicity symptoms, defined as solicited local injection site or systemic reactions during the seven days after vaccination, were frequent, mostly mild to moderate and short-lived after dosing for both adult age groups. The vaccine’s AE profile did not suggest any specific safety concerns (WHO SAGE, 2021). The US CDC and FDA recommend that adolescents age 12 to 17 years old can receive a 3rd primary series at least 4 weeks after the 2nd dose and 4th booster shot at least 2 months after their last dose (CDC 2022).

The phase 2/3 pivotal registration trial of the BNT162b2 (Pfizer-BioNTech) vaccine was conducted at sites in six countries (Argentina, Brazil, Germany, South Africa, Turkey and the USA) and involved about 43 000 participants aged 16 to 85 years. The estimated vaccine efficacy (VE) was 94.6% (95% credibility interval (CI) 89.9–97.3%). Reactogenicity and adverse events associated with the vaccine were generally milder and less frequent in the older group (≥55 years of age) than the younger group (18–55 years of age) and tended to increase after the second dose. Reactogenicity was mostly mild to moderate and short-lived for both adult age groups (WHO SAGE, 2021). The WHO SAGE approved BNT162b2 (Pfizer-BioNTech) vaccines for children aged 6 months and older, having met the necessary criteria for safety and efficacy for administration (WHO SAGE, 2022). On 5th January 2022, the US CDC endorsed the Advisory Committee on Immunization Practices’ (ACIP) recommendation to expand eligibility of booster doses to those 12 to 15 years old. CDC recommended that adolescents age 12 to 17 years old should receive a booster shot 5 months after their initial Pfizer-BioNTech vaccination series. ACIP reviewed the available safety data following the administration of over 25 million vaccine doses in adolescents; COVID-19 vaccines are safe and effective (CDC 2022).

The FDA and WHO have both recommended continued evaluation of vaccine effectiveness following issuance of a EUA and/or licensure which is critical to address the existing uncertainties, with high urgency to understand homologous and heterologous boosting, both for improved coverage of variants of concern and due to limitations of global vaccine availability. The VIBRI Consortium proposes to carry out a Multi-Centre Phase 2b RCT to evaluate the Safety and Immunogenicity of the Janssen Ad26COVS1 and, the Novavax NVX-CoV2373 and mRNA (Moderna mRNA-1273 or Pfizer/BNT) vaccines used as homologous and heterologous boost strategies among HIV positive adolescents and adults with a small control arm of HIV (-) participants. The trial will enroll up to 300 HIV (+) adolescents 12 to 17 years and about 1,650 adults aged 18 to 64 years (of which 1350 will be HIV (+) and 300 HIV (-), who have completed a primary series with a homologous vaccine series based on any one vaccine platform of a) mRNA (Moderna or Pfizer), b) adenovirus 26 (J&J) or c) inactivated (Sinopharm or Sinovac).  These three have been the main vaccine platforms introduced across the three participating countries (Kenya, Democratic Republic of Congo and Rwanda) as of the current protocol. Participants must have completed the primary series at least 3 months prior to enrollment.  In Stage 1, the booster vaccines will be evaluated in adult participants 18-64 years while in Stage 2, the booster vaccines will be assessed in adolescents 12-17 years of age.

Given the difference in vaccine rollout between countries, the timing of enrollment within each country is expected to stagger.  All adult participants will be randomized 1:1 within their primary vaccine platform to receive either a single dose of Janssen Ad26COVS1 vaccine or Novavax NVX-CoV2373 COVID-19 vaccine between 5 and 7 months from completion of their primary series for adult participants and ≥5-12. All adolescent participants will be randomized 1:1 within their primary vaccine platform to receive either a single dose of Novavax NVX-CoV2373 COVID-19 vaccine or an mRNA (Moderna mRNA-1273 or Pfizer/BNT) vaccine ≥5 months after the primary series for adolescent participants. The booster vaccination interval for adolescents is consistent with new guidances guidance from the US CDC/FDA and is reflective of real-world settings  implementation of country MOH COVID-19 vaccination programs.  Due to the uncertainty of vaccine supply and to allow for adequate capture of participants, the pre-booster vaccination enrollment period may vary anywhere from -85 days to 0 days till the time of boost (Day 0).